John J. Stachowicz

Synonyms:

Jay

Affiliation:

University of California-Davis (UC Davis)

Address:

Department of Evolution and Ecology
1 Shields Ave
Davis, CA
USA 95616

ORCiD:

0000-0003-2735-0564

Activities reported for John J. Stachowicz:

Program coordination

None

Project coordination

Long-term and interactive effects of seaweed diversity and herbivory on intertidal community structure and functioning (Intertidal Diversity)	Lead Principal Investigator
Global biodiversity and functioning of eelgrass ecosystems (Zostera Experimental Network 2) (ZEN 2)	Co-Principal Investigator
Connecting genetic diversity to ecosystem functioning: links between genetic diversity, relatedness and trait variation in a seagrass community (Genetic Div to Ecosys Functioning)	Principal Investigator, Contact
Collaborative Research: The role of a keystone pathogen in the geographic and local-scale ecology of eelgrass decline in the eastern Pacific (Eelgrass disease)	Principal Investigator
Using genomics to link traits to ecosystem function in the eelgrass Zostera marina (ZosteraEcoGenomics)	Principal Investigator, Contact
Collaborative Research: Applying the stress gradient hypothesis to understand the microbial facilitation of seagrass responses to thermal stress (ZMARTS)	Principal Investigator

Deployment coordination

Deployment	Platform	Role
BML_Stachowicz	Bodega Marine Laboratory	Principal Investigator
BodegaBay_Stachowicz	Bodega Marine Reserve	Principal Investigator
Stachowicz_Eelgrass_Transects_2012	Bodega Harbor	Principal Investigator

Datasets

Project: Using genomics to link traits to ecosystem function in the eelgrass Zostera marina

Dataset	Version Date	Current State
Sample collection and sequence accession information for Zostera marina whole genome resequencing from specimens collected at 16 geographic locations worldwide in 2017 Principal Investigator	2024-04-10	Final no updates expected
Shoot measurements (sheath length and width) for the eelgrass (Zostera marina) shoots sampled for whole genome sequencing collected from Bodega and Tomales Bay, CA, USA from July to September 2019 Principal Investigator	2024-04-10	Final no updates expected
Sample collection information and sequence accessions at the National Center for Biotechnology Information (NCBI) for whole genome sequencing of eelgrass (Zostera marina) collected at Bodega and Tomales Bay, CA, USA from July to September 2019 Principal Investigator	2024-04-10	Final no updates expected
Temperature data recorded using HOBO Pendant MX2201 loggers deployed at 14 sites in Tomales Bay and Bodega Harbor during August 2019 Principal Investigator	2024-04-09	Final no updates expected

Project: Collaborative Research: The role of a keystone pathogen in the geographic and local-scale ecology of eelgrass decline in the eastern Pacific

Dataset	Version Date	Current State
Seagrass Microbiome Data Principal Investigator, Contact	2024-07-23	Preliminary and in progress
Eelgrass disease metrics from ecological field surveys along the eastern Pacific coast in June through August of 2019, 2020, and 2021. Co-Principal Investigator	2022-10-13	Final no updates expected
Eelgrass shoot density measurements taken during ecological field surveys along the eastern Pacific coast in June through August of 2019, 2020, and 2021. Co-Principal Investigator	2022-10-13	Final no updates expected
Eelgrass shoot metrics from ecological field surveys in six regions along the eastern Pacific coast in June through August of 2019, 2020, and 2021. Co-Principal Investigator	2022-10-13	Final no updates expected
In situ temperature measurements from eelgrass meadow field sites along the west coast of North America recorded from July 2019 to July 2021 Co-Principal Investigator	2022-10-14	Final no updates expected

Project: CAREER: Linking genetic diversity, population density, and disease prevalence in seagrass and oyster ecosystems

Dataset	Version Date	Current State
Microbial taxa (amplicon sequence variant or ASV) statistical analyses for two seagrass genotypes from wasting disease mesocosm experiments at Bodega Marine Laboratory in July-Sept of 2015 Scientist	2022-10-27	Final no updates expected
Quantitative PCR cell count estimates from samples of DNA extracted from seagrass wasting disease parasite, Labyrinthula zosterae from wasting disease mesocosm experiments at Bodega Marine Laboratory in July-Sept of 2015 Scientist	2022-10-27	Final no updates expected
Temperature from seagrass wasting disease mesocosm experiments at Bodega Marine Laboratory in June-July 2015 Scientist	2022-10-27	Final no updates expected
Seagrass metrics from from seagrass wasting disease mesocosm experiments conducted at Bodega Marine Laboratory from July-September 2015 Scientist	2022-10-06	Final no updates expected

Project: Connecting genetic diversity to ecosystem functioning: links between genetic diversity, relatedness and trait variation in a seagrass community

Dataset	Version Date	Current State
Eelgrass (Zostera marina) diversity metrics from 15-month field experiment in Bodega Bay, CA starting in the summer of 2013 Principal Investigator, Contact	2018-01-31	Final no updates expected
Eelgrass (Zostera marina) physiological and morphological traits measured between March of 2013 and August of 2014 using eelgrass collected in Bodega Bay, CA in May of 2012 Principal Investigator, Contact	2018-06-28	Final no updates expected
Site information for eelgrass (Zostera marina) transects in Bodega Bay, CA in May of 2012 Principal Investigator, Contact	2018-06-12	Final no updates expected
Biodiversity experiments: Effects of diversity in feeding trials, conducted at Bodgea Marine Laboratory, using detritus from eelgrass (Zostera marina) genotypes (clones) as a food source and either one or a combination of invertebrate grazers Principal Investigator	2017-09-15	Final no updates expected
Invertebrate survival: Invertebrate survival rates from feeding experiments, conducted at Bodega Marine Laboratory, where food sources (eelgrass (Zostera marina) genotypes) were varied Principal Investigator	2017-09-15	Final no updates expected
Feeding trials: Effects of diversity in feeding trials, conducted at Bodgea Marine Laboratory, using detritus from eelgrass (Zostera marina) genotypes (clones) as a food source and either one or a combination of invertebrate grazers Principal Investigator	2017-09-15	Final no updates expected
A re-sampling of historical population genetic surveys of Zostera marina from Bodega, Tomales, and San Francisco Bays USA; study performed at Bodega Marine Laboratory in 2014-15 Principal Investigator	2016-10-12	Final no updates expected
Results from experiment examining Zostera marina genotype response to warming from the Bodega Marine Laboratory Principal Investigator	2016-05-17	Final no updates expected

Project: Global biodiversity and functioning of eelgrass ecosystems (Zostera Experimental Network 2)

Dataset	Version Date	Current State
Experimental results of tethered amphipod and isopod survival in global eelgrass habitats, summer 2015 (Zostera Experimental Network 2; ZEN2) Co-Principal Investigator	2018-01-24	Final no updates expected
Abiotic and biotic data from Zostera Experimental Network (ZEN) 2014 surveys (ZEN 2 project) Co-Principal Investigator	2016-09-26	Final no updates expected

Project: Long-term and interactive effects of seaweed diversity and herbivory on intertidal community structure and functioning

Dataset	Version Date	Current State
Rock wall manipulation experiment conducted in Bodega Bay, CA from 2010-2011 Principal Investigator	2016-04-01	Final no updates expected
Percent cover and abundance of algae and invertebrates in the rocky intertidal zone from Bodega Marine Reserve, CA from 2004-2013 (Intertidal Diversity project) Principal Investigator	2014-10-01	Final no updates expected
Invertebrate survey counts in the rocky intertidal zone from Bodega Marine Reserve, CA, 2004-2013 (Intertidal Diversity project) Principal Investigator	2014-10-01

Status message

Database

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John J. Stachowicz

Activities reported for John J. Stachowicz: