Parameter: SRA_study

Short Description: NCBI SRA study accession (SRP)
Short Name: SRA_study
Official Name: SRA_study

Description

The National Center for Biotechnology Information (NCBI) study accession in the Sequence Read Archive (SRA).

 A Study is a set of experiments and has an overall goal.  It contains the project metadata describing a sequencing study or project. Imported from NCBI BioProject. 

Identifier usually begins with SRP

DatasetPI-Supplied DescriptionPI-Supplied Name
16S V4 rRNA gene tag sequences from reef seawater samples collected in the Florida Keys and the U.S. Virgin Islands in 2019-2020SRA study ID SRA_Study
18s DNA sequences of planktonic animals that are potential prey of siphonophores in water off California USA from 2016-2020The NCBI identifier for the SRA study associated with the data SRA Study
Information about sequences of coral, Acropora cervicornis, collected from host colonies at the Mote Marine Laboratory in situ coral nursery in Looe Key, Lower Florida Keys in November and December 2019SRA study identifier SRA_Study
Sequences from the coral Acropora cervicornis determined before and after bleaching at the Mote Marine Laboratory in August and September 2015SRA study identifier SRA_study_ID
Sequences from the coral Acropora cervicornis determined before and after bleaching at the Mote Marine Laboratory in August and September 2015Descriptive title of SRA study SRA_title
Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019NCBI SRA study accession (SRP) Study_Accession
Flow cytometry, 16S rRNA gene amplicons, chlorophyll a, and surface seawater measurements taken between August 2017 to June 2019 Kāneʻohe Bay, Oʻahu, HawaiʻiNCBI Study ID. study
Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, HawaiʻiNCBI Study ID for amplicon data. Amplicon_study
Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, HawaiʻiNCBI Study ID for metagenomes. Metagenome_study
Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletiiNCBI SRA study accession ID SRA_Study
Analysis protocols, sample information, code, and datasets associated with the manuscript Structure and long-term stability of the microbiome in diverse diatom cultures from samples collected in Guam, California, and Gulf of Mexico between 2008 and 2016NCBI Sequence Read Archive (SRA) Study identifier SRA_Study
18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020Accession ID for study in SRA Study_Accession
High-throughput sequencing of the 16S rRNA gene, microscopy, and flow cytometry of pyrosome-associated microorganisms compared to seawater sampled during a Pyrosoma atlanticum bloom in the Northern California Current System in July 2018.NCBI study accession ID sra_study_accession
Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female from the R/V Tiglax and R/V Sikuliaq in the Northern Gulf of Alaska from 2015-2022NCBI SRA study accession (SRP) Study_Accession
16S rRNA gene of microorganisms sampled along the Newport Hydrographic (NH) and Trinidad Head (TR) lines, in OR and CA in 2018 and 2019NCBI study accession ID sra_study_accession
NCBI accession numbers describing 16S rRNA and 16S rRNA gene amplicon sequences from sediment samples collected offshore of San Francisco, Califronia, USA in March 2017 on R/V Oceanus cruise OC1703ANCBI SRA title SRA_title
19 Metagenomes and 7 metatranscriptomes from sediment samples collected offshore of San Francisco, Califronia, USASRA study accession SRA_study_ID
19 Metagenomes and 7 metatranscriptomes from sediment samples collected offshore of San Francisco, Califronia, USASRA title SRA_title
NCBI accession numbers describing nifH amplicon sequences from sediment samples collected offshore of San Francisco, Califronia, USA in March 2017 on R/V Oceanus cruise OC1703ASRA study accession SRA_study
Genetic sequence accessions, collection information, and methodology for raw sequences from ezRAD libraries of Pocillopora spp. collected in Moorea, French Polynesia in 2019NCBI SRA Study ID SRA_Study
RADseq data from Atlantic silversides used for linkage and QTL mapping.NCBI SRA study accession number SRA_study_accession
Sequence read accession (SRA) numbers and collection metadata for coral microbiome collected in Moorea, French Polynesia from Jul 2018 to Aug 2020SRA study Identifier SRA_Study
Salp and pteropod associated microorganisms from the Western Edge of the Gulf Stream sampled in September 2019.NCBI study accession ID sra_study_accession
NCBI submission number. Submission
Sample information for 16S and 18S V4 amplicon sequencing of microbial communities in sinking particles and water column samples collected during R/V Atlantic Explorer cruises AE1718 and AE1809 in 2017 and 2018 at BATS in BermudaStudy identifier in the Sequence Read Archive (SRA) at the National Center for Biotechnology Information (NCBI) SRA_study_ID
Microbial Symbionts, Carbon, and Nutrient Cycling in Caribbean Coral Reef Sponges from Conch Reef, Key Largo (Florida, USA) and Carrie Bow Cay (Belize) in June and July 2016NCBI SRA Study number SRAStudy
Data from common garden experiment containing three populations of T. rotula NBCI SRA accession for project Study_Accession
T. rotula microbiome global sampleNCBI SRA accession for the projct Study_Accession
Metagenomic Time Series of Winam Gulf, Lake Victoria from 2022-2023 (ASI Lake Victoria project)Raw study ID assigned by the sequencing core. StudyID
Sample collection and sequence accession information for Zostera marina whole genome resequencing from specimens collected at 16 geographic locations worldwide in 2017NCBI SRA Study Accession identifier SRA_accession
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