Parameter: Life Science Identifier (LSID)

Short Description:

Life Science Identifier (LSID)

Short Name:

LSID

Official Name:

LSID

External Identifier:

» skos:exactMatch http://rs.tdwg.org/dwc/terms/scientificNameID

External Identifier:

» skos:exactMatch http://mmisw.org/ont/cf/parameter/biological_taxon_lsid

External Identifier:

» skos:exactMatch http://vocab.nerc.ac.uk/collection/P07/current/K78S23CW

Description

Definition from https://www.lsid.info/ (Accessed 2024-07-29):

The Life Sciences Identifier (LSID) is an Interoperable Informatics Infrastructure Consortium (I3C) and OMG Life Sciences Research (LSR) Uniform Resource Name (URN) specification in progress.

The LSID concept introduces a straightforward approach to naming and identifying data resources stored in multiple, distributed data stores in a manner that overcomes the limitations of naming schemes in use today. Almost every public, internal, or department-level data store today has its own way of naming individual data resources, making integration between different data sources a tedious, never-ending chore for informatics developers and researchers.

By defining a simple, common way to identify and access biologically significant data, whether that data is stored in files, relational databases, in applications, or in internal or public data sources, LSID provides a naming standard underpinning for wide-area science and interoperability.

A detailed LSID URN naming specification is available at the OMG LSR.

Datasets associated with this parameter

Dataset Name	Brief Description	Project	PI-Supplied Parameter Name
Allometric scaling of calcification for Mytilus californianus		OA decoupling	LSID
Bacterial communities and relative abundances of the pathogen Vibrio coralliilyticus in feces of coral reef fish	Bacterial communities and relative abundances of the pathogen Vibrio coralliilyticus in feces of coral reef fish	Fish transmit microbes	host_LSID
Control incubation data during calcification experiments		OA decoupling	LSID
Field measurements of periostracum cover from focal population		OA decoupling	LSID
Fossil Seal Amino Acid Isotopes	C and N isotope data for individual amino acids from fossil seals from the western Ross Sea, Antarctica	Southern Ocean Pinnipeds	WoRMS_LSID
Gastropod counts by species collected from inactive sulfides on the East Pacific Rise		Inactive Sulfides, Vent Settlement Cues	scientificNameID
Hydrothermal vent parasite species reported in published literature	Literature review of deep-sea hydrothermal vent parasite, egg predator, and micropredator species	EPR Functional Diversity, Vent Settlement Cues	PARASITE_SPECIES_LSID
Incubation data for Mytilus californianus calcification	Incubation data for Mytilus californianus calcification	OA decoupling	LSID
Larvae collected near Mariana Back-Arc hydrothermal vents in 2010	Larvae collected near Mariana Back-Arc hydrothermal vents in 2010	Mariana Back-arc Vents, Vent Settlement Cues	LSID
Larval Sebastes Diet and Morphometric Data		RAPID Anchovy Response	Species_lsid, Prey_Taxa_lsid
Megafauna counts by taxon in image surveys at inactive sulfides on the East Pacific Rise		Inactive Sulfides	WoRMS_scientificNameID
Modern Seal Amino Acid Isotopes	N isotope data for individual amino acids from modern west Antarctic seals	Southern Ocean Pinnipeds	WoRMS_LSID
Modern Seal Bulk Isotopes	C and N isotope data for seal tissues from west Antarctica	Southern Ocean Pinnipeds	WoRMS_LSID
Mussel lab incubations: periostracum and pH (effect on shell dissolution)		OA decoupling	LSID
Parasite abundance in coral reef fishes	Parasite abundance data collected from coral reef fishes across 19 islands in the central equatorial Pacific from 2009 to 2021	Diversity-disease	psite_LSID, fish_LSID
Parasite taxonomic and life cycle information	Literature review metazoan parasite species	EPR Functional Diversity, Vent Settlement Cues	PARASITE_SPECIES_NAME_LSID
Port Fourchon, LA Species Range Data		Louisiana E-scapes	LSID
Shell dissolution data for Mytilus californianus		OA decoupling	LSID

Programs associated with this parameter

None

Status message

Database

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Parameter: Life Science Identifier (LSID)