| 16S V4 rRNA gene tag sequences from reef seawater samples collected in the Florida Keys and the U.S. Virgin Islands in 2019-2020 | NCBI BioProject number
| BioProject |
| 18s DNA sequences of planktonic animals that are potential prey of siphonophores in water off California USA from 2016-2020 | The NCBI identifier for the BioProject associated with the data
| BioProject |
| Information about sequences of coral, Acropora cervicornis, collected from host colonies at the Mote Marine Laboratory in situ coral nursery in Looe Key, Lower Florida Keys in November and December 2019 | NCBI BioProject identifier
| BioProject |
| Sequences from the coral Acropora cervicornis determined before and after bleaching at the Mote Marine Laboratory in August and September 2015 | NCBI BioProject identifier
| bioproject_accession |
| Amplicon sequence variants (ASVs) and taxonomy of Pseudo-nitzschia spp. from Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 | NCBI BioProject accession number
| BioProject |
| Sample and genetic accession information for RNA-seq data from whole Atlantic silverside (Menidia menidia) larvae from two populations and their F1 hybrids reared under different temperatures in 2017 | NCBI BioProject Identifier
| BioProject |
| Sampling and experimental metadata related to 'Candidatus' Aquarickettsia rohweri transcriptome data from host Acropora cervicornis colonies collected at Looe Key, Lower Florida Keys from Apr to Jun of 2019 | BioProject identifier at NCBI
| BioProject |
| Bacterial transcriptional response to picoeukaryote Micromonas commoda | NCBI Bioproject Accession
| BioProject |
| NCBI accession metadata for Eukaryotic viruses encoding ribosomal protein eL40 from samples collected on KM1419 and KM1108 from Mar 2011 to Sep 2014 | Bioproject number associated with FloV-SA2 and Florenciella sp.strain UHM3020
| Bioproject_number |
| Microbiome composition of coral species collected from reefs in Mo'orea, French Polynesia and exposed to various experimental treatments in August 2018 | NCBI BioProject number
| BioProject |
| Evolutionary and acclimatory shifts in gene expression of Eurytemora affinis copepods reared in saline and freshwater conditions during laboratory experiments from 2011-2014 | NCBI BioProject identifier
| BioProject |
| Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019 | NCBI BioProject accession
| BioProject |
| Biological, physical, and chemical data from surface Transect 5 on MV1405 (IRN-BRU) | NCBI SRA Bioproject accession number for diatom 18S amplicon sequencing.
| BIOPROJECT_ACCESSION |
| Single-cell amplified genomes (SAGs) of uncultivated Aminicenantia bacteria from the subseafloor of Juan de Fuca Ridge (JdFR) from deployments of R/V Atlantis AT18-07 and AT42-11 from 2011 and 2019 | NCBI (National Center for Biotechnology Information) BioProject identifier
| BioProject |
| Collection information and genetic accession identifiers for Single Amplified Virus Genomes from hydrothermal fluids at IODP HOLE U1362B CORK observatory from R/V Atlantis cruise AT18-07 ROV Jason dives at the Juan de Fuca Ridge Flank in July of 2011 | NCBI BioProject accession
| NCBI_BioProject |
| Flow cytometry, 16S rRNA gene amplicons, chlorophyll a, and surface seawater measurements taken between August 2017 to June 2019 Kāneʻohe Bay, Oʻahu, Hawaiʻi | NCBI Bioproject Accession for amplicon data.
| bioproject_accession |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | NCBI Biosample Accession.
| Amplicon_bioproject_accession |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | NCBI Biosample Accession.
| Metagenome_bioproject_accession |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | NCBI Bioproject accession ID
| BioProject |
| Analysis protocols, sample information, code, and datasets associated with the manuscript Structure and long-term stability of the microbiome in diverse diatom cultures from samples collected in Guam, California, and Gulf of Mexico between 2008 and 2016 | NCBI BioProject
| BioProject |
| Contextual data for samples collected for metagenome sequencing from the deep subseafloor biosphere as accessed via CORKs along the Juan de Fuca Ridge flank in the Northeast Pacific Ocean between 2008 and 2014 | National Center for Biotechnology Information (NCBI) BioProject accession number (https://www.ncbi.nlm.nih.gov/)
| NCBI_Bioproject_Accession |
| Data from nutrient manipulation experiments (conducted on EXPORTS cruise DY131) aimed at relieving or inducing nutrient stress in phytoplankton and quantifying these responses using metatranscriptomic sequencing | The National Center for Biotechnology Information (NCBI) BioProject identifier. A BioProject is a collection of biological data related to a single initiative, originating from a single organization or from a consortium. A BioProject record provides users a single place to find links to the diverse data types generated for that project.
| BioProject |
| Microbiome dynamics of coral reef and cleanerfish from ecological surveys, in situ manipulations, and laboratory experiments conducted from 2020-2021 | SRA BioProject Accession number
| BioProject_accession |
| Microbiome data from sponges collected in 2013 and 2014 from reefs in Honduras, Belize, Panama and the Florida Keys. | Bioproject NCBI accession number
| Bioproject |
| Eukaryotic and prokaryotic microbial taxa retained by wild-caught doliolids collected during bloom events at three different shelf locations in the northern California Current system in June 2019. | NCBI Bioproject accession ID
| bioproject_accession |
| High-throughput sequencing of the 16S rRNA gene, microscopy, and flow cytometry of pyrosome-associated microorganisms compared to seawater sampled during a Pyrosoma atlanticum bloom in the Northern California Current System in July 2018. | NCBI Bioproject accession ID
| bioproject_accession |
| Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female from the R/V Tiglax and R/V Sikuliaq in the Northern Gulf of Alaska from 2015-2022 | NCBI BioProject accession
| BioProject |
| NCBI accession numbers for RNAseq data from five coral species experimentally exposed to Stony Coral Tissue Loss Disease (SCTLD) at the University of the Virgin Islands in 2019 | NCBI BioProject number
| BioProject |
| NCBI accession numbers from a study of two tintinnid ciliate species, Schmidingerella arcuata and Schmidingerella meunieri | NCBI BioProject identifier
| NCBI_BioprojectProject_ID |
| RNAseq data from apparently healthy and Stony Coral Tissue Loss Disease-affected Montastraea cavernosa coral collected from St. Thomas, US Virgin Islands in 2020 | NCBI BioProject accession number
| NCBI_BioProject_accession |
| 16S rRNA gene of microorganisms sampled along the Newport Hydrographic (NH) and Trinidad Head (TR) lines, in OR and CA in 2018 and 2019 | NCBI Bioproject accession ID
| bioproject_accession |
| NCBI accession numbers describing 16S rRNA and 16S rRNA gene amplicon sequences from sediment samples collected offshore of San Francisco, Califronia, USA in March 2017 on R/V Oceanus cruise OC1703A | NCBI BioProject accession
| BioProject |
| 19 Metagenomes and 7 metatranscriptomes from sediment samples collected offshore of San Francisco, Califronia, USA | BioProject accession
| BioProject |
| NCBI accession numbers describing nifH amplicon sequences from sediment samples collected offshore of San Francisco, Califronia, USA in March 2017 on R/V Oceanus cruise OC1703A | BioProject accession
| BioProject |
| Genetic sequence accessions, collection information, and methodology for raw sequences from ezRAD libraries of Pocillopora spp. collected in Moorea, French Polynesia in 2019 | NCBI SRA BioProject ID
| BioProject |
| Pooled sequencing data of field-collected Eurytemora affinis copepods from nine locations in North America collected October 2012 to March 2014 | NCBI BioProject identifier
| BioProject |
| Pseudo-nitzschia spp. presence-absence and environmental data in Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 | NCBI BioProject number
| NCBI_BioProject |
| RADseq data from Atlantic silversides used for linkage and QTL mapping. | NCBI BioProject accession number
| bioproject_accession |
| Sample information and genetic accession information for raw low-coverage genomic sequence reads from 248 different Atlantic silverside (Menidia menidia) collected along the east coast of North America between 2005 to 2007 | NCBI BioProject accession number
| bioproject_accession |
| RNAseq data used to identify Alphaflexivirus genomes in Stony Coral Tissue Loss Disease-affected, disease-exposed, and disease-unexposed coral colonies in the U.S. Virgin Islands (Multi-Species Coral Disease project) | BioProject Accession ID
| Accession |
| Salp and pteropod associated microorganisms from the Western Edge of the Gulf Stream sampled in September 2019. | NCBI Bioproject accession ID
| bioproject_accession |
| NCBI BioProject number.
| BioProject |
| Sequencing reads_(2bRAD) for Montastrea cavernosa, Siderastrea siderea, Agaricia agaricites and Porites astreoides from Florida Reefs | Bioproject number
| BioProject |
| Sample information for 16S and 18S V4 amplicon sequencing of microbial communities in sinking particles and water column samples collected during R/V Atlantic Explorer cruises AE1718 and AE1809 in 2017 and 2018 at BATS in Bermuda | BioProject accession identifier at the National Center for Biotechnology Information (NCBI)
| bioproject_accession |
| Microbial Symbionts, Carbon, and Nutrient Cycling in Caribbean Coral Reef Sponges from Conch Reef, Key Largo (Florida, USA) and Carrie Bow Cay (Belize) in June and July 2016 | NCBI BioProject number
| BioProject |
| A characterization of microbes at the San Pedro Ocean Time-series (SPOT) from 2005 to 2018, using SSU rRNA gene sequencing from two size fractions, with a universal primer set that amplifies from prokaryotes and eukaryotes | National Center for Biotechnology Information (NCBI) project identifier
| study_accession |
| Metadata for transcriptomic expression data from cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002 grown in defined culture media with either glucose, acetate, or a mix of both as carbon substrates | NCBI BioProject Accession Number
| BioProject |
| Collection of subsurface bacteria Nitrospirota and Nitrospinota genome data including IMG and NCBI accessions for sequence datasets in June 2021 (Slow Life in Crust project) | NCBI BioProject accession (National Center for Biotechnology Information)
| BioProject |
| Data from common garden experiment containing three populations of T. rotula | NCBI BioProject identifier
| BioProject |
| T. rotula microbiome global sample | NCBI BioProject ID number
| Bioproject |
©2020 Biological and Chemical Oceanography Data Management Office.