| 16S microbiome metadata collected from shallow artificial reef sponges and seawater in the Florida Keys, USA from Apr 2021 to Aug 2021 | NCBI BioSample accession number
| accession |
| 18s DNA sequences of planktonic animals that are potential prey of siphonophores in water off California USA from 2016-2020 | The NCBI identifier for the BioSample associated with the data
| BioSample |
| Information about sequences of coral, Acropora cervicornis, collected from host colonies at the Mote Marine Laboratory in situ coral nursery in Looe Key, Lower Florida Keys in November and December 2019 | SRA BioSample identifier
| BioSample |
| Sample and genetic accession information for RNA-seq data from whole Atlantic silverside (Menidia menidia) larvae from two populations and their F1 hybrids reared under different temperatures in 2017 | NCBI BioSample Identifier
| BioSample |
| Bacterial communities and relative abundances of the pathogen Vibrio coralliilyticus in feces of coral reef fish collected on the north shore of Mo’orea, French Polynesia, Oct 2020 | NCBI Biosample accession ID
| BioSample |
| Accession numbers for metagenome-assembled genomes (MAGs) from samples collected in 2018 on R/V Thompson cruise TN350 at the Upper and Lower Cones, Upper Caldera Wall and NW Caldera, Brothers Volcano | Genbank Biosample accession number
| Biosample_accession |
| Sampling and experimental metadata related to 'Candidatus' Aquarickettsia rohweri transcriptome data from host Acropora cervicornis colonies collected at Looe Key, Lower Florida Keys from Apr to Jun of 2019 | BioSample accession number in the National Center for Biotechnology Information (NCBI) BioSample database
| BioSample_Accession |
| Bacterial transcriptional response to picoeukaryote Micromonas commoda | NCBI Biosample Accession
| Accession |
| Pool-seq data from laboratory selection lines of copepods collected from Kiel Canal in Germany in 2017 and 2018 | NCBI BioSample
| BioSample |
| Pool-seq data from wild populations of copepods in the Baltic Sea from May 2018 through August 2019 | NCBI BioSample
| BioSample |
| Microbiome composition of coral species collected from reefs in Mo'orea, French Polynesia and exposed to various experimental treatments in August 2018 | NCBI BioSample number
| BioSample |
| Evolutionary and acclimatory shifts in gene expression of Eurytemora affinis copepods reared in saline and freshwater conditions during laboratory experiments from 2011-2014 | NCBI BioSample number
| BioSample |
| Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019 | NCBI BioSample accession
| BioSample |
| Biological, physical, and chemical data from surface Transect 5 on MV1405 (IRN-BRU) | NCBI SRA Biosample accession number for diatom 18S amplicon sequencing.
| BIOSAMPLE_ACCESSION |
| Single-cell amplified genomes (SAGs) of uncultivated Aminicenantia bacteria from the subseafloor of Juan de Fuca Ridge (JdFR) from deployments of R/V Atlantis AT18-07 and AT42-11 from 2011 and 2019 | NCBI (National Center for Biotechnology Information) BioSample identifier
| BioSample |
| Collection information and genetic accession identifiers for Single Amplified Virus Genomes from hydrothermal fluids at IODP HOLE U1362B CORK observatory from R/V Atlantis cruise AT18-07 ROV Jason dives at the Juan de Fuca Ridge Flank in July of 2011 | NCBI BioSample accession
| BioSample |
| Flow cytometry, 16S rRNA gene amplicons, chlorophyll a, and surface seawater measurements taken between August 2017 to June 2019 Kāneʻohe Bay, Oʻahu, Hawaiʻi | NCBI Biosample Accession.
| biosample_accession |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | NCBI Bioproject Accession for amplicon data.
| biosample_accession |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | NCBI Biosample accession ID
| BioSample |
| Analysis protocols, sample information, code, and datasets associated with the manuscript Structure and long-term stability of the microbiome in diverse diatom cultures from samples collected in Guam, California, and Gulf of Mexico between 2008 and 2016 | NCBI BioSample
| BioSample |
| Metadata for longread sequencing of Carcinus maenas collected from Buzzards Bay, Massachusetts from May 2022 to Aug 2022 | Individual NCBI BioSample code
| biosample_accession |
| Metadata for RNASeq of green crabs collected in the northeast Pacific from Apr 2017 to Aug 2021 | Individual NCBI BioSample code
| biosample_accession |
| Metadata for targeted genotyping of green crabs collected in the northeast Pacific from Aug 2016 to Oct 2022 | Individual NCBI BioSample code
| biosample_accession |
| Metagenome and metatranscriptome sequences from deep-sea hydrothermal vent microbial communities collected on cruises AT42-22, TN405, and NA108 from May 2019 to Jun 2022 | Biosample ID number in NCBI
| BIOSAMPLE |
| Contextual data for samples collected for metagenome sequencing from the deep subseafloor biosphere as accessed via CORKs along the Juan de Fuca Ridge flank in the Northeast Pacific Ocean between 2008 and 2014 | National Center for Biotechnology Information (NCBI) BioSample accession number (https://www.ncbi.nlm.nih.gov/)
| NCBI_Biosample_Accession |
| Data from nutrient manipulation experiments (conducted on EXPORTS cruise DY131) aimed at relieving or inducing nutrient stress in phytoplankton and quantifying these responses using metatranscriptomic sequencing | The National Center for Biotechnology Information (NCBI) BioSample accession number in the BioSample database. The BioSample database stores descriptive information about the physical biological materials used to generate data submitted to NCBI's primary data archives. Typical examples of a BioSample include a cell line, a tissue biopsy or an environmental isolate. The BioSample database promotes the use of structured and consistent attribute names and values to describe sample properties and provenance. BioSample records are reciprocally linked to data derived from that sample and to the BioProjects in which they participate.
| BioSample |
| Microbiome dynamics of coral reef and cleanerfish from ecological surveys, in situ manipulations, and laboratory experiments conducted from 2020-2021 | SRA BioSample Accession number
| BioSample_accession |
| Microbiome data from sponges collected in 2013 and 2014 from reefs in Honduras, Belize, Panama and the Florida Keys. | Biosample NCBI accession number
| Accession |
| Eukaryotic and prokaryotic microbial taxa retained by wild-caught doliolids collected during bloom events at three different shelf locations in the northern California Current system in June 2019. | NCBI Biosample accession ID
| biosample_accession |
| High-throughput sequencing of the 16S rRNA gene, microscopy, and flow cytometry of pyrosome-associated microorganisms compared to seawater sampled during a Pyrosoma atlanticum bloom in the Northern California Current System in July 2018. | NCBI Biosample accession ID
| biosample_accession |
| Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female from the R/V Tiglax and R/V Sikuliaq in the Northern Gulf of Alaska from 2015-2022 | NCBI BioSample accession
| BioSample |
| NCBI accession numbers for RNAseq data from five coral species experimentally exposed to Stony Coral Tissue Loss Disease (SCTLD) at the University of the Virgin Islands in 2019 | NCBI BioSample accession number
| Biosample_Accession |
| NCBI accession numbers from a study of two tintinnid ciliate species, Schmidingerella arcuata and Schmidingerella meunieri | NCBI BioSample identifier
| Sample_Accession |
| RNAseq data from apparently healthy and Stony Coral Tissue Loss Disease-affected Montastraea cavernosa coral collected from St. Thomas, US Virgin Islands in 2020 | NCBI BioSample accession number
| NCBI_BioSample_accession |
| 16S rRNA gene of microorganisms sampled along the Newport Hydrographic (NH) and Trinidad Head (TR) lines, in OR and CA in 2018 and 2019 | NCBI Biosample accession ID
| biosample_accession |
| NCBI accession numbers describing 16S rRNA and 16S rRNA gene amplicon sequences from sediment samples collected offshore of San Francisco, Califronia, USA in March 2017 on R/V Oceanus cruise OC1703A | NCBI BioSample accession
| BioSample |
| 19 Metagenomes and 7 metatranscriptomes from sediment samples collected offshore of San Francisco, Califronia, USA | BioSample accession
| BioSample |
| NCBI accession numbers describing nifH amplicon sequences from sediment samples collected offshore of San Francisco, Califronia, USA in March 2017 on R/V Oceanus cruise OC1703A | BioSample accession
| BioSample |
| Genetic sequence accessions, collection information, and methodology for raw sequences from ezRAD libraries of Pocillopora spp. collected in Moorea, French Polynesia in 2019 | NCBI SRA BioSample ID
| BioSample |
| Pooled sequencing data of field-collected Eurytemora affinis copepods from nine locations in North America collected October 2012 to March 2014 | NCBI BioSample number
| BioSample |
| Pseudo-nitzschia spp. presence-absence and environmental data in Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 | NCBI BioSample accession number
| NCBI_BioSample |
| RADseq data from Atlantic silversides used for linkage and QTL mapping. | NCBI BioSample accession number
| biosample_accession |
| Sample information and genetic accession information for raw low-coverage genomic sequence reads from 248 different Atlantic silverside (Menidia menidia) collected along the east coast of North America between 2005 to 2007 | NCBI BioSample accession number
| biosample_accession |
| Biogeochemistry, metabolomics, and metagenomics of Florida's Coral Reef from sampling conducted over 15 days in June 2019 | Accession number for a specific sample. Only relevant for the sequencing data uploaded to the NCBI Sequence Read Archive. "Not applicable" = data is not relevant
| biosample_accession |
| Salp and pteropod associated microorganisms from the Western Edge of the Gulf Stream sampled in September 2019. | NCBI Biosample accession ID
| biosample_accession |
| Sampling information and sequence accessions for 18S-V4 sequences from surface water collected at the Santa Monica Pier (SMP) Santa Monica Bay, CA from 2018 to 2019 | NCBI BioSample ID
| BioSample |
| NCBI BioSample number.
| BioSample |
| Sample information for 16S and 18S V4 amplicon sequencing of microbial communities in sinking particles and water column samples collected during R/V Atlantic Explorer cruises AE1718 and AE1809 in 2017 and 2018 at BATS in Bermuda | BioSample accession identifier at the National Center for Biotechnology Information (NCBI)
| biosample_accession |
| Microbial Symbionts, Carbon, and Nutrient Cycling in Caribbean Coral Reef Sponges from Conch Reef, Key Largo (Florida, USA) and Carrie Bow Cay (Belize) in June and July 2016 | NCBI BioSample number
| BioSample |
| A characterization of microbes at the San Pedro Ocean Time-series (SPOT) from 2005 to 2018, using SSU rRNA gene sequencing from two size fractions, with a universal primer set that amplifies from prokaryotes and eukaryotes | National Center for Biotechnology Information (NCBI) sample accession number
| sample_accession |
©2020 Biological and Chemical Oceanography Data Management Office.