Parameter: external_link

Short Description:

external_link

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external_link

Official Name:

external_link

Units:

text

Units External Identifier:

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Description

Link to an external data entry.

Datasets associated with this parameter

Dataset Name	Brief Description	Project	PI-Supplied Parameter Name
16S and 18S rRNA gene amplicon sequences	16S and 18S rRNA gene amplicon sequences	HHQSignals	biosample_link
16S rRNA gene Amplicon Library	16S rRNA gene Amplicon Library accession numbers	OA microbe adaptation, PICO	NCBI_link
16S rRNA gene sequences from iron mats	Accession links to NCBI for 16S rRNA gene sequences from iron mats	Ecology of Vent Mats	accession_link
16S rRNA sequence and collection data	Microbial 16S rRNA sequence data from East Pacific Rise biofilms	Microbial Communities at Deep-Sea Vents	BioProject_link, SRA_expt_link, accession_link
16S V4 rRNA gene tag sequences from reef seawater	16S V4 rRNA gene tag sequences from reef seawater	Quantitative coral microbiomes	SRA_run_link
Alteromonas ancestor	Clones of Prochlorococcus MIT9312 and link to BioProject	P-ExpEv	bioproject_link
Antarctic_benthic_organisms	Stressor effects on Antarctic gastropods	OA_Antarctic_organisms	repository
ARK27-3: Bulk FLA hydrolysis rates	ARK27-3: Bulk FLA	Patterns of activities	comments
ARK27-3: Bulk MCA hydrolysis rates	ARK27-3: Bulk MCA	Patterns of activities	comments
ARK27-3: GF FLA hydrolysis rates	ARK27-3: gravity filtered fluorescence (GF FLA)	Patterns of activities	comments
ARK27-3: GF MCA hydrolysis rates	ARK27-3: gravity filtered fluorescence (GF MCA)	Patterns of activities	comments
ARK27-3: Sediment MCA hydrolysis rates	ARK27-3: sediment MCA	Patterns of activities	comments
Assembled genome sequence for the virus ANMV-1	Assembled genome sequence for the virus ANMV-1	Viruses in Methanotrophic Marine Ecosystems	Link
Atlantic silverside (Menidia menidia) cDNA transcriptome and TSA accessions	Atlantic silverside (Menidia menidia) cDNA transcriptome and TSA accessions	Fishery Genome Changes	accession_link
BiMat	MATLAB library to analyze bipartite ecological networks.	Phage-Bacteria-Nets	link
BioInformatics - MorrisJPR_HOOHgenes_2016	BioInformatics - MorrisJPR_HOOHgenes_2016	WP2	Link
Cannon_2013_T2: NCBI accessions	Hemichordata and Echinodermata NCBI accessions	Antarctic Inverts	link_accession_rDNA_18S, link_accession_rDNA_16S
Cannon_2014_S2: Hemichordata and Echinodermata sample log and accessions	Hemichordata and Echinodermata transcriptome NCBI accessions	Antarctic Inverts	link_NCBI_accession
Community 16S rRNA gene sequences	16S rRNA accessions	Vibrio-dust deposition	NCBI_link
Coral colony sequece accessions: Hidden resilience to recurrent bleaching		Bleaching American Samoa	Accession_link
Coral colony sequence accessions: The genomics of recovery from coral bleaching		Bleaching American Samoa	accession_link
Coral Sample Microbiome	Coral Sample Microbiome	Killer Seaweeds	URL_NCBI
Coral SSU rRNA gene database	Coral SSU rRNA gene database	Coral Microbial Relationships	Accession_link
CRRF Palau Weather Data	Palau weather data	PaPaPro	external_link
dataset1_Krug_et_al_2015: Suppl. Table 3: Accessions	Table 3: accessions: COI, 16S, 28S. H3 for ~200 spp.	PLDvFST	accession_COI_link, accession_16S_link, accession_H3_link
dataset2_Krug_et_al_2012: Elysia accessions	Elysia spp. accessions for COI, 16S, H3	PLDvFST	NCBI_COI_accession_link, NCBI_16S_accession_link, NCBI_H3_accession_link
dataset3_Supp1_Krug_et_al_2011: Elysia sequences	Accessions for COI, 16S, H3 for 18 Elysia species	PLDvFST	accession_COI_link, accession_16S_link, accession_H3_link
dataset4_Krug_et_al_2012: Philine sequences	Accessions for 16S for Philine species	PLDvFST	accession_16S_link
dataset5_Vendetti_et_al_2012: Elysia pusilla sequences	Accessions for COI, 16S, H3 from Elysia pusilla and E. spp.	PLDvFST	accession_COI_link, accession_16S_link, accession_H3_link
dataset6_Krug_et_al_2013: Sequences	Accessions for COI, H3 for three species complexes	PLDvFST	accession_COI_link, accession_H3_link
DIF_records	Metadata submitted to Global Change Master Directory (GMDC), GLOBEC-GB	GB	description
DIF_records	Metadata submitted to U.S. Antarctic Data Coordination Center	NEP	description
DIF_records	Metadata submitted to U.S. Antarctic Data Coordination Center	SOGLOBEC	description
Domel_2017_T1: Pallenopsis patagonica specimen and outgroups with accessions	Pallenopsis patagonica specimen and outgroups with accessions	Antarctic Inverts	COI_NCBI_link, ITS_NCBI_link
HADES-K - Navigation Track Images	HADES-K - Navigation Track Images	HADES	Image_File
Halanych-Kocot_2014_T1: NCBI accessions	Antarctic invertebrate collection locations and NCBI SRA accessions	Antarctic Inverts	link_NCBI_SRA_accession
Halanych_2013_T1: NCBI accessions	NCBI accessions	Antarctic Inverts	link_accession_rDNA_18S, link_accession_rDNA_16S
Harder_2016_T1: sea spider Pallenopsis sampling sites and COI NCBI accessions	Sea spider Pallenopsis sampling sites and COI NCBI accessions	Antarctic Inverts	accession_link
Havird_2015_T1: NCBI accessions: COX and PXDN	NCBI accessions	Antarctic Inverts	link_NCBI_accession
Havird_2015_T2: NCBI accessions: MPO and PXDN	NCBI accessions: MPO and PXDN outgroups	Antarctic Inverts	link_NCBI_accession
Hawaiian reef fish genetic accessions 2016	Genetic accessions at NCBI Genbank	Hawaiian Fish Origins	Genbank_First_Accession_Link
Hydrographic and nutrient data		ETNP_ParticleOmics	URL
Illumina Sequences		SedimentaryIronCycle	link
Inferno vent plume proteins-Av1	proteins from Inferno hydrothermal vent plume meta-proteome - replicate Av1	Sulfur Oxidizers	NCBI_FASTA_link
Inferno vent plume proteins-Av2	proteins from Inferno hydrothermal vent plume meta-proteome - replicate Av2	Sulfur Oxidizers	NCBI_FASTA_link
Janosik_2013_T2: outgroup species and accessions	Outgroup species and accessions	Antarctic Inverts	link_NCBI_accession
Metaproteomics of Bering Strait Ship-board 10 day bacterial Incubations.		Proteins as Biomarkers	Project_URL
Methane seep 16S rRNA sequences	16S rRNA gene sequences of cells in marine methane seep sediments	Cell-sorting and enrichment	accession_link
Microbial eukaryotic focused metatranscriptome data		SPOT	SRA_run_link
MMETSP transcriptome sequences	Eukaryote transcriptome assemblies and associated metadata available on iMicrobe	P-ExpEv	external_link
mRNA sequencing - RNAseq	mRNA sequencing - RNAseq	OA pH, Temp, Calc Inverts	link
NCBI accession numbers for S. arcuata and S. meunieri	NCBI accession numbers for S. arcuata and S. meunieri	Ciliate Omics	other_links
Nitrogen fixing prokaryotes in corals	Comparative genomics of color morphs in the coral Montastraea cavernosa	NitroFixCorals	Data_Link
NPHZ-V	NPHZ-V ecosystem model.	Phage-Bacteria-Nets	external_link
PRISM Video Plankton Recorder raw data	VPR data from the Ross Sea PRISM project, Dec. 2011 - Feb. 2012	PRISM-RS	data_link
Proteomic data of dilution series of bacteria and diatoms using MS (DDA).		Proteins as Biomarkers	Project_URL
Proteomic data of dilution series of bacteria and diatoms using MS.		Proteins as Biomarkers	Project_URL
Proteomics Colwellia psychrerythraea strain 34H at subzero temperatures.		Bacterial Recyclers	URL
Pro_ancestor	Clones of Prochlorococcus MIT9312 and link to BioProject	P-ExpEv	BioProject_link
Raw LC-MS/MS	Raw LC-MS/MS data with list of identified peptides in xml format.	Proteomic profiling of Mariprofundus ferrooxydans	data_URL
Raw LC-MS/MS and DNA	Raw LC-MS/MS data, with list of identified peptides, and DNA sequences.	Proteomic profiling of Mariprofundus ferrooxydans	repository, URL
Raw metagenome and metatranscriptome from an Fe mat at Loihi Seamount	Sample accession numbers for raw metagenome and metatranscriptome Illumina HiSeq 2500 sequencing from an Fe mat at Loihi Seamount	Ecology of Vent Mats	accession_link
RNA sequence accessions at NCBI		Kleptoplasty	BioProject_link
RNA sequences	NCBI RNA accessions for multi-stressor conditions of polar fishes	polar_fish_adapt	accession_link
Ross Sea sequences	Ross Sea sequences link	TRACERS	accession_link
Salp genome and transcriptome	Antarctic salp genome and RNAseq transcriptome	Salp_Antarctic	BioSample_accession_link, SRA_accession_link
Seagrass Microbiome Data		Eelgrass disease	download_path
Sediment Bacteria Accession Numbers	Lake surface sediment and submarine canyon sediment bacterial V1-V3 iTag sequence libraries.	Buried Alive	NCBI_link
Seep Sediment Metagenome ANM1 - Genbank BioSample SAMN00215736	Seep Sediment Metagenome ANM1	Viruses in Methanotrophic Marine Ecosystems	Link
Shotgun Metaproteomics of Bering Strait surface water and Chukchi Sea bottom water.		Bacterial Recyclers	Project_URL
Shotgun Proteomics of Bering Sea algal incubations.		Bacterial Recyclers	Project_URL
Shotgun Proteomics of Pseudonitzschia multiseries Multi stress incubations.		Bacterial Recyclers	URL
shrimp nets with kites_bycatch	Use of Kites in Shrimp Codends to Reduce Small Shrimps and Bycatch Species	NEC-CoopRes	link
SIMCO metatranscriptome sequence accessions	SIMCO metatranscriptome sequence accessions	SIMCO	SRA_link
Single amplified genomes	Single amplified genomes (SAGs)	Dark ocean chemoautotrophs	IMG_accession_link
Single-cell genomics of Chloroflexi	Chloroflexi accessions	Subsurface FeOBs	BioSample_link, NCBI_accession_link, IMG_link
ssDNA-dsDNA viromes	ssDNA-dsDNA viromes from the Great Lakes, off Bermuda and the South Pacific	GOV	iVirus_link, iVirus_url
Synechococcus Batch Culture Sampling Data		StoichTraitD	RCC_Link
TN327 Axial 2015 ROV Samples		NeMO2015	URL
Total spectral count of proteins (MetZyme 0.2)	Global metaproteomic dataset for KM1128 the METZYME expedition.	MetZyme	KO_link
Trawl survey: species list	Species list	PelagicHypoxia	WoRMS_link
Trichodesmium consortia FASTq accessions	NCBI accession numbers for raw RNA-seq fastq files derived from laboratory-maintained Trichodesmium erythraeum cultures	HiCO2_AdaptCyano, TriCoLim	GSM_link
Trichodesmium sequence accessions	GenBank Trichodesmium accessions and associated metadata	P Processing by Tricho	NCBI_accession_link
Vent_CSP_SAG	Single amplified genomes (SAGs) of microbial cells isolated from Crab Spa, East Pacific Rise	Microbial Communities at Deep-Sea Vents	accession_link
ZooProcess and Ecotaxa Output Along Physical Gradients from OAPS		Zooplankton Gradients	object_link
ZooProcess and Ecotaxa Output for Zooplankton Mediated Aggregates		Zooplankton Mediation	object_link

Programs associated with this parameter

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Parameter: external_link